PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011080320.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bHLH
Protein Properties Length: 420aa    MW: 46005.2 Da    PI: 6.2691
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011080320.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.91.5e-12351396655
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++Er RR +i +++ +L+el+P+      k  + +++L +Av+YIk+Lq
  XP_011080320.1 351 SIAERVRRTKISERIRKLQELVPNM----EKQTNTSDMLDLAVDYIKDLQ 396
                     689*********************6....4679****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.881345395IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474597.33E-16348409IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.96E-13349400No hitNo description
Gene3DG3DSA:4.10.280.104.9E-15350408IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.8E-9351396IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.5E-13351401IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010119Biological Processregulation of stomatal movement
GO:0042335Biological Processcuticle development
GO:0048573Biological Processphotoperiodism, flowering
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 420 aa     Download sequence    Send to blast
MNNNQQQQQN MQMGSAGLTR YRSAPSSYFA SFLDTPTADG GFGADHLEQL FNPRASSPET  60
QRIFSRFMNG TADTIQENSF SNMTLPSKSQ LNSQFFPPRS KESDPQQQLQ RQQSNDYSSA  120
SQIVYQTHNS GAANSAAMQN SYNRPFDSFS SMKVEGGGAV GGSSLVRHSS SPAGLLANIS  180
IENEFGSVRG IGNFGGGNSA NAEASFSSAS RFKNQMEFSS RLSSSRLMDP ISEIGNNGIG  240
ENSRGPGPLD DDPSNDGDYI PGFTSNSWDD SSVLSDNFLQ ELADNDNKRF SNANVSDDQN  300
NKGGNRPTTQ LSHHLSLPTS STELSAMEKL LQDSVPCKIR AKRGFATHPR SIAERVRRTK  360
ISERIRKLQE LVPNMEKQTN TSDMLDLAVD YIKDLQRQVK TLSDNRAKCS CSAKQESYVD
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00646PBMTransfer from LOC_Os08g39630Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011080320.10.0PREDICTED: transcription factor bHLH130-like
TrEMBLA0A022S1T51e-158A0A022S1T5_ERYGU; Uncharacterized protein
STRINGSolyc12g100140.1.11e-120(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA46052239
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.13e-48bHLH family protein